Extracting biological pathway models from NLP event representations

Author

Spranger, Michael and Palaniappan, Sucheendra and Ghosh, Samik

Abstract

This paper describes an an open-source software system for the automatic conversion of NLP event representations to system biology structured data interchange formats such as SBML and BioPAX. It is part of a larger effort to make results of the NLP community available for system biology pathway modelers.